Machine Learning/HMM
Hidden Markov Models
[edit | edit source]Papers/Tutorials
[edit | edit source]Implementations
[edit | edit source]- GHMM (C)
- HMMER (compiled C-apps for Protein (possibly speech) analysis)
- logilab-hmm (Python)
- HMM Toolbox (MATLAB)
- jahmm (Java)
- I found Mathieu Blondel's writeup really helpful -- jahmm is a good package
R
[edit | edit source]- HMM: very simple hidden markov models
- hmm.discnp: allows observations of multiple runs
- msm: continuous time, with covariates, multiple runs
- Example